CDS

Accession Number TCMCG057C41213
gbkey CDS
Protein Id XP_018445004.1
Location complement(join(14534219..14534650,14534740..14534829,14534907..14535166,14535256..14535436,14535523..14535723,14535831..14535932,14536007..14536444,14536518..14536706,14536788..14536905,14536989..14537143))
Gene LOC108816936
GeneID 108816936
Organism Raphanus sativus

Protein

Length 721aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018589502.1
Definition PREDICTED: homeobox-leucine zipper protein HDG11 isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description homeobox-leucine zipper protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K09338        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009664        [VIEW IN EMBL-EBI]
GO:0009827        [VIEW IN EMBL-EBI]
GO:0009828        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010090        [VIEW IN EMBL-EBI]
GO:0010091        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071669        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090626        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTTTCGTCGTCGGAGGAAGTGGTAGCGGTGGAGGCGGAGACGGCGGTGGTGGTGGTAGTGGTAGCCAACGACACGACGGAGGCTCTGAAACTGATAGGAAGAAGAAACGTTACCATCGTCATACTGCTCAACAGATTCAACGCCTCGAATCGAGTTTCAGGGAGTGTCCTCATCCAGATGATAAGCAGAGGAATCTACTTAGCAAAGAGTTGGGTTTGGCTCCTCGTCAGATCAAGTTCTGGTTCCAGAACAGACGTACTCAGCTTAAGGCTCAACATGAGAGAGCAGATAACAGTGCACTGAAAGCAGAGAACGATAAGATTAGATGCGAGAACATTGCCATCAGAGAAGCTATCAAGCATGCTATATGCCCAAACTGTGGTGGTCCTCCCGTTAGTGAAGATCCTTACTTAGATGAGCAAAAGCTTCGCATGGAAAACGCTCATCTCAGAGAAGAGCTTGAAAGAATGTCCACCGTTGCATCAAAGTACATGGGAAGACCAATCTCCTCTCACATCTCAACGCTCCACCCAATGCACATCTCCCCCTTGGATCTGTCTATGACTAGTTTAACCGGTCCTTCGCTGGATTTCGATCTTCTTCCGGGAAGCTCTATGTCTACTAGTAACTTTGCTGTATCTGACATGGATAAGCCTATTATGAACGACATTGCCTTGACTGCCATGCAAGAATTGCTCAGGCTTTTCAACACAAACGAGCCTCTGTGGAACAGAGCAGATGGGTGCAGAGACGTTCTCAATCTTGGAAGCTATGAGAATGTTTTCCCAAGGTCAAGTAACCGAGGGAAGAACCATAACCTTAGAATCGAGGCGTCTAGGTCCTCTGGTATTGTTTTCATGAATGCTATGTCACTTGTTGACATGTTTATGGATAGTGCTAAGTGGGGAGAGCTGTTTCCTTCAATCGTAGCAGCTTCTAAAACCCTTGCAGTGGTTTCTTCAGGAATGGGAGGTACCTATGAGGGTGCATTGCATTTGATGTATGAAGAGATGGAAGTGCTTTCTCCATTAGTAGCAACACGCGAGTTCTGCGAGCTACGCTACTGTCAGCAGATTGAACAAGGGAGCTGGATAGTTGTAAATGTCTCTTATCATCTTCCTCAGTTTGTTTCCCACTCTCACTCCTATAGGTTTCCATCTGGATGCTTAATTCAGGACATGCCTAATGGATACTCCAAGGTTACTTGGGTAGAGCATACTGAAACAGAAGAAAAAGAAGCGGTTCATGAGCTGTACAGAGAGATGGTTCACAAAGGGATTGCTTTTGGAGCTGAACGATGGGTTACTACTCTCCAGAGAATGTGTGAGAGATATGCTTCTCTATTAGCACCAGCAGCTTCATCTCGTGAACTCGGTGGAGTGATTCCATCGCCGGAAGGGAAGAGAAGCATGATGAGACTTGCTCATAGAATGGTTAGCAACTACTGCATAAGTGTCAGCAGATCTAACAACACTCGCTCAACAGTTGTTGCGGAGTTGAACGACGTTGGTGTCCGTGTGACTGCACACAAGAGCCCTGAACCAAACGGCACTGTCCTCTCTGCGGCTACCACTTTCTGGCTCCCAAACTCTCCTCAAAACGTCTTCAACTTCCTCAAAGACGAAAGAACACGTCCTCAGTGGGATGTTCTTTCAAATAGTAACGCTGTGCAAGAAGTTGCTCACATCGCAAATGGATCACATCCTGGATGCTGCATATCGGTTCTACGTGCATCAAGTGCATCACAGAGTAACAACATGCTGATTCTACAAGAAAGCTCAATAGACTCATCAGGAGCACTAGTTGTGTACAGTCCGGTGGATTTATCAGCGCTGAACATCGCAATGAACGGTGACGATACTTCATACATCCCCCTCTTGTCCTCAGGTTTCGCTATCTCACCAGACGGAAACCACAACAGTTTAACCGCTGAGCAAGGAGGAGGAGGGGCCTCGACTAGCTCAGGACGGTCATCATCATCAAGCGGTTTTGGTGGAGGAGGATCGTTGATAACGGTTGGGTTTCAGATAATGGTTAGCAACTTGCCGTCTGCTAAACTGAATATGGAGTCTGTGGAAACGGTTAATAACCTGATTGGAACCACAGTGCACCAGATTAAAACCGGGTTGAACAACTGTCCTAGTGCTTCAGCTACAGCTTGA
Protein:  
MSFVVGGSGSGGGGDGGGGGSGSQRHDGGSETDRKKKRYHRHTAQQIQRLESSFRECPHPDDKQRNLLSKELGLAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENIAIREAIKHAICPNCGGPPVSEDPYLDEQKLRMENAHLREELERMSTVASKYMGRPISSHISTLHPMHISPLDLSMTSLTGPSLDFDLLPGSSMSTSNFAVSDMDKPIMNDIALTAMQELLRLFNTNEPLWNRADGCRDVLNLGSYENVFPRSSNRGKNHNLRIEASRSSGIVFMNAMSLVDMFMDSAKWGELFPSIVAASKTLAVVSSGMGGTYEGALHLMYEEMEVLSPLVATREFCELRYCQQIEQGSWIVVNVSYHLPQFVSHSHSYRFPSGCLIQDMPNGYSKVTWVEHTETEEKEAVHELYREMVHKGIAFGAERWVTTLQRMCERYASLLAPAASSRELGGVIPSPEGKRSMMRLAHRMVSNYCISVSRSNNTRSTVVAELNDVGVRVTAHKSPEPNGTVLSAATTFWLPNSPQNVFNFLKDERTRPQWDVLSNSNAVQEVAHIANGSHPGCCISVLRASSASQSNNMLILQESSIDSSGALVVYSPVDLSALNIAMNGDDTSYIPLLSSGFAISPDGNHNSLTAEQGGGGASTSSGRSSSSSGFGGGGSLITVGFQIMVSNLPSAKLNMESVETVNNLIGTTVHQIKTGLNNCPSASATA